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https://doi.org/10.12688/wellcomeopenres.16063.2
Method Article metrics
Revised
An optimization of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams
[version 2; peer review: 2 approved]
Khadija Said Mohammed, Zaydah R. de Laurent, Donwilliams O. Omuoyo, Clement Lewa, Elijah Gicheru, Robinson Cheruiyot, Brian Bartilol, Shadrack Mutua, Jennifer Musyoki, Horace Gumba, Jedidah Mwacharo, Debra Riako, Shaban J. Mwangi, Bonface M. Gichuki, Lydia Nyamako, Angela Karani, Henry Karanja, Daisy Mugo, John N. Gitonga, Susan Njuguna, Wilson Gumbi, Brian Tawa, Metrine Tendwa, Wesley Cheruiyot, Yiakon Sein, John K. Nyambu, Shem O. Patta, Thani Suleiman Thani, Eric K. Maitha, Benson Kitole, Mohamed S. Mwakinangu, Barke S. Muslih, John Ochieng Otieno, Joyce U. Nyiro, Patience Kiyuka, Leonard Ndwiga, Kevin Wamae, Domtila Kimani, Johnstone Makale, John Mwita Morobe, Victor Osoti, Arnold W. Lambisia, Calleb Odundo, Salim Mwarumba, Martin Mutunga, Philip Bejon, Benjamin Tsofa, Charles N. Agoti, Lynette Isabella Ochola-Oyier
Peer Reviewers Davis Nwakanma; Esther Omuseni and John Waitumbi
  • Funders
  • Wellcome Trust
  • DELTAS Africa Initiative
  • PATH
  • National Institute for Health Research
  • Department for International Development, UK Government
LATEST VERSION PUBLISHED 04 Mar 2022
https://doi.org/10.12688/wellcomeopenres.16848.2
Research Article metrics
Revised
Low diagnostic yield and time to diagnostic confirmation results in prolonged use of antimicrobials in critically ill children
[version 2; peer review: 2 approved, 1 approved with reservations]
John Clark, Deborah White, Esther Daubney, Martin Curran, Rachel Bousfield, Theodore Gouliouris, Elizabeth Powell, Adam Palmer, Shruti Agrawal, David Inwald, Iain Kean, M. Estée Török, Stephen Baker, Nazima Pathan
Peer Reviewers Arne Simon; Sanjay Patel; Ahmed El-Nawawy
  • Funders
  • Wellcome Trust
  • Action Medical Research
  • Gates Cambridge Trust
  • NIHR Cambridge Biomedical Research Centre
  • Addenbrooke's Charitable Trust, Cambridge University Hospitals
  • Academy of Medical Sciences
LATEST VERSION PUBLISHED 03 Mar 2022
https://doi.org/10.12688/wellcomeopenres.16967.2
Research Article metrics
Revised
Neurocognitive outcomes of tuberculous meningitis in a primarily HIV-positive Ugandan cohort
[version 2; peer review: 1 approved, 2 approved with reservations]
Carson M Quinn, John Kasibante, Alice Namudde, Ananta S Bangdiwala, Mable Kabahubya, Noeline Nakasujja, Sarah Lofgren, Alison Elliott, David R Boulware, David B Meya, Fiona V Cresswell
Peer Reviewers Deanna Saylor; Reuben Robbins; Pablo F. Belaunzarán-Zamudio
  • Funders
  • Wellcome Trust
  • National Institute of Allergy and Infectious Diseases
  • National Institute of Neurological Disorders and Stroke
  • Wellcome
LATEST VERSION PUBLISHED 03 Mar 2022
https://doi.org/10.12688/wellcomeopenres.16524.3
Research Article metrics
Revised
Individual-level variations in malaria susceptibility and acquisition of clinical protection
[version 3; peer review: 2 approved]
John Joseph Valletta, John W.G. Addy, Adam J. Reid, Francis M. Ndungu, Yaw Bediako, Jedida Mwacharo, Khadija Said Mohammed, Jennifer Musyoki, Joyce Mwongeli Ngoi, Joshua Wambua, Edward Otieno, Matt Berriman, Philip Bejon, Kevin Marsh, Jean Langhorne, Chris I. Newbold, Mario Recker
Peer Reviewers Lucy C. Okell; Wendy Prudhomme-O'Meara and Christine Markwalter
  • Funders
  • Wellcome Trust
  • Cancer Research UK
  • Medical Research Council
  • Crick Africa Network
LATEST VERSION PUBLISHED 25 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17702.1
Research Article metrics
“My life is not going to be the same, my health is going to improve”: a cross-sectional qualitative study of patients’ experiences of living with chronic respiratory symptoms and their views on a proposed pulmonary rehabilitation program at Queen Elizabeth Central Hospital, Blantyre, Malawi
[version 1; peer review: 1 not approved]
FANUEL MECKSON BICKTON, Talumba Mankhokwe, Martha Mitengo, Felix Limbani, Harriet Shannon, Jamie Rylance, Enock Chisati
Peer Reviewers Yuyu Jiang
  • Funders
  • Wellcome Trust
  • Royal Society of Tropical Medicine and Hygiene
PUBLISHED 25 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17661.1
Research Article metrics
Epidemiology of COVID-19 infections on routine polymerase chain reaction (PCR) and serology testing in Coastal Kenya
[version 1; peer review: 2 approved]
James Nyagwange, Leonard Ndwiga, Kelvin Muteru, Kevin Wamae, James Tuju, COVID testing team, Bernadette Kutima, John N. Gitonga, Henry Karanja, Daisy Mugo, Kadondi Kasera, Patrick Amoth, Nickson Murunga, Lawrence Babu, Edward Otieno, George Githinji, D.J. Nokes, Benjamin Tsofa, Benedict Orindi, Edwine Barasa, George Warimwe, Charles N. Agoti, Philip Bejon, Lynette Isabella Ochola-Oyier
Peer Reviewers Olusola Anuoluwapo Akanbi; Maryam Meskini
  • Funders
  • African Academy of Sciences
  • USAID
  • EDCTP
  • GAVI
  • Oak Foundation
  • UNITAID
  • International AIDS Vaccine Initiative
  • Government of the United Kingdom
  • Wellcome
  • National Institute for Health Research
  • New Partnership for Africa's Development
  • Gates Foundation
PUBLISHED 23 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17632.1
Software Tool Article metrics
Streamlined processing and analysis of 16S rRNA amplicon sequencing data with OCMS_16S and OCMSlooksy
[version 1; peer review: 1 approved, 1 approved with reservations]
Sandi Yen, Jethro Johnson, Nicholas E. Ilott
Peer Reviewers Susana Fuentes; Andrea Telatin
  • Funders
  • Wellcome
  • NIHR Oxford Biomedical Research Centre
  • Kennedy Trust for Rheumatology Research
PUBLISHED 23 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17428.2
Research Article metrics
Revised
Immunohistochemistry localises myosin-7a to cochlear efferent boutons
[version 2; peer review: 2 approved]
Piotr Sirko, Andrei S. Kozlov
Peer Reviewers Walter Marcotti; Hiroshi Hibino
  • Funders
  • Wellcome Trust
  • Army Research Office
LATEST VERSION PUBLISHED 22 Feb 2022
https://doi.org/10.12688/wellcomeopenres.15934.4
Research Article metrics
Revised
Eco-geographic patterns of child malnutrition in India and its association with cereal cultivation: An analysis using demographic health survey and agriculture datasets
[version 4; peer review: 1 approved, 2 approved with reservations, 1 not approved]
Rama Krishna Sanjeev, Prashanth Nuggehalli Srinivas, Bindu Krishnan, Yogish Channa Basappa, Akshay S. Dinesh, Sabu K. Ulahannan
Peer Reviewers Edward J.M. Joy; Suparna Ghosh-Jerath; Nicholas J. Kassebaum; Ilana Cliffer
  • Funder
  • The Wellcome Trust DBT India Alliance
LATEST VERSION PUBLISHED 22 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17247.2
Research Article metrics
Revised
Date of introduction and epidemiologic patterns of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in Mogadishu, Somalia: estimates from transmission modelling of satellite-based excess mortality data in 2020
[version 2; peer review: 2 approved]
Mihaly Koltai, Abdihamid Warsame, Farah Bashiir, Terri Freemantle, Chris Reeve, Chris Williams, Mark Jit, Stefan Flasche, Nicholas G. Davies, CMMID COVID-19 working group, Ahmed Aweis, Mohamed Ahmed, Abdirisak Dalmar, Francesco Checchi
Peer Reviewers Zindoga Mukandavire; Bhaswar Ghosh
  • Funders
  • Wellcome Trust
  • Foreign, Commonwealth and Development Office
  • UK Research and Innovation
LATEST VERSION PUBLISHED 18 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17550.1
Systematic Review metrics
Influences on User Trust in Healthcare Artificial Intelligence: A Systematic Review
[version 1; peer review: 4 approved with reservations]
Eva Jermutus, Dylan Kneale, James Thomas, Susan Michie
Peer Reviewers Yao Song; Dania Humaidan; Megan Coffee; Nicolas Brault
  • Funders
  • Wellcome Trust
  • Economic and Social Research Council
PUBLISHED 18 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17678.1
Study Protocol metrics
A protocol for a longitudinal, observational cohort study of infection and exposure to zoonotic and vector-borne diseases across a land-use gradient in Sabah, Malaysian Borneo: a socio-ecological systems approach
[version 1; peer review: 1 approved, 2 approved with reservations]
Kimberly Fornace, Benny Obrain Manin, Jason Matthiopoulos, Heather M. Ferguson, Chris Drakeley, Kamruddin Ahmed, Koay Teng Khoon, Robert M. Ewers, Sylvia Daim, Tock Hing Chua
Peer Reviewers Konstans Wells; Jessica E. Manning; Gabriel Zorello Laporta
  • Funder
  • Wellcome Trust
PUBLISHED 16 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17631.1
Study Protocol metrics
Effectiveness and implementation of a lifestyle modification intervention for women with isolated impaired fasting glucose: Study protocol for a hybrid type 2 study in Kerala, India
[version 1; peer review: 2 approved]
Elezebeth Mathews, Thirunavukkarasu Sathish, Anjaly Joseph, Bhagieshwari Kodapally, Jissa Vinoda Thulaseedharan, KM Venkat Narayan, Brian Oldenburg, Kavumpurathu Raman Thankappan
Peer Reviewers David Flood; Priti Gupta
  • Funder
  • The Wellcome Trust DBT India Alliance
PUBLISHED 15 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17253.2
Research Article metrics
Revised
Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination
[version 2; peer review: 2 approved]
Vasilis Kontis, James E. Bennett, Robbie M. Parks, Theo Rashid, Jonathan Pearson-Stuttard, Perviz Asaria, Bin Zhou, Michel Guillot, Colin D. Mathers, Young-Ho Khang, Martin McKee, Majid Ezzati
Peer Reviewers Rajeev Gupta; Virgilio Gómez-Rubio
  • Funders
  • Wellcome Trust
  • British Heart Foundation
  • US Environmental Protection Agency
LATEST VERSION PUBLISHED 15 Feb 2022
https://doi.org/10.12688/wellcomeopenres.16856.3
Research Article metrics
Revised
Singing and music making: physiological responses across early to later stages of dementia
[version 3; peer review: 2 approved]
Nina Walker, Sebastian J. Crutch, Julian West, Fergal W. Jones, Emilie V. Brotherhood, Emma Harding, Paul M. Camic
Peer Reviewers Jeanette Tamplin; Loris Tamara Schiaratura
  • Funder
  • Wellcome Trust
LATEST VERSION PUBLISHED 14 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17516.1
Research Article metrics
Public attitudes to a human challenge study with SARS-CoV-2: a mixed-methods study
[version 1; peer review: 2 approved]
Caroline Barker, Katharine Collet, Diane Gbesemete, Maria Piggin, Daniella Watson, Philippa Pristerà, Wendy Lawerence, Emma Smith, Michael Bahrami-Hessari, Halle Johnson, Katherine Baker, Ambar Qavi, Carmel McGrath, Christopher Chiu, Robert C. Read, Helen Ward
Peer Reviewers Dorcas M Kamuya; Susan Bull
  • Funders
  • Wellcome
  • GCRF Networks in Vaccines Research and Development
  • National Institute of Health Research
PUBLISHED 10 Feb 2022
https://doi.org/10.12688/wellcomeopenres.16535.2
Open Letter metrics
Revised
Towards a feminist philosophy of engagements in health-related research
[version 2; peer review: 2 approved]
Sonja Erikainen, Ellen Stewart, Angela Marques Filipe, Sarah Chan, Sarah Cunningham-Burley, Sophie Ilson, Gabrielle King, Carol Porteous, Stephanie Sinclair, Jamie Webb
Peer Reviewers Mary Madden; Kieran C. O'Doherty
  • Funder
  • Wellcome Trust
LATEST VERSION PUBLISHED 10 Feb 2022
https://doi.org/10.12688/wellcomeopenres.16429.2
Research Article metrics
Revised
Large-scale assessment of 7-11-year-olds’ cognitive and sensorimotor function within the Born in Bradford longitudinal birth cohort study
[version 2; peer review: 3 approved, 1 approved with reservations]
Liam JB Hill, Katy A. Shire, Richard J Allen, Kirsty Crossley, Megan L Wood, Dan Mason, Amanda H Waterman
Peer Reviewers Beatrice Valentini and Evie Vergauwe; James Tresilian; Mariza Kampouri; Sinead Rhodes
  • Funders
  • Wellcome Trust
  • UK Medical Research Council and UK Economic and Social Science Research Council
  • ESRC White Rose Doctoral Training Partnership Pathway Award
  • National Institute for Health Research Yorkshire and Humber ARC
LATEST VERSION PUBLISHED 09 Feb 2022
https://doi.org/10.12688/wellcomeopenres.17656.1
Research Article metrics
Spatio-temporal distribution of antimalarial drug resistant gene mutations in a Plasmodium falciparum parasite population from Kilifi, Kenya: A 25-year retrospective study
[version 1; peer review: 2 approved with reservations]
Irene Omedo, Brian Bartilol, Domtila Kimani, Sónia Gonçalves, Eleanor Drury, Martin K. Rono, Abdirahman I. Abdi, Jacob Almagro-Garcia, Roberto Amato, Richard D. Pearson, Lynette Isabella Ochola-Oyier, Dominic Kwiatkowski, Philip Bejon
Peer Reviewers Fatima Nogueira; Melissa Conrad
  • Funder
  • Wellcome Trust
PUBLISHED 08 Feb 2022
https://doi.org/10.12688/wellcomeopenres.16768.2
Research Article metrics
Revised
Importation, circulation, and emergence of variants of SARS-CoV-2 in the South Indian state of Karnataka
[version 2; peer review: 2 approved]
Chitra Pattabiraman, Pramada Prasad, Anson K. George, Darshan Sreenivas, Risha Rasheed, Nakka Vijay Kiran Reddy, Anita Desai, Ravi Vasanthapuram
Peer Reviewers Nei-Yuan Hsiao; Richard Orton
  • Funders
  • Government of Karnataka
  • National Institute of Mental Health and Neurosciences
  • DBT/Wellcome Trust India Alliance
LATEST VERSION PUBLISHED 07 Feb 2022
1,041-1,060 of 2,072 ARTICLES
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