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https://doi.org/10.12688/wellcomeopenres.15583.1
Software Tool Article metrics
PYLFIRE: Python implementation of likelihood-free inference by ratio estimation
[version 1; peer review: 2 approved]
Jan Kokko, Ulpu Remes, Owen Thomas, Henri Pesonen, Jukka Corander
Peer Reviewers Samuel Wiqvist; Guilherme Rodrigues
  • Funders
  • Wellcome Trust
  • Academy of Finland
  • European Research Council
PUBLISHED 10 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15533.1
Software Tool Article metrics
NeuroChaT: A toolbox to analyse the dynamics of neuronal encoding in freely-behaving rodents in vivo
[version 1; peer review: 3 approved]
Md Nurul Islam, Seán K. Martin, John P. Aggleton, Shane M. O’Mara
Peer Reviewers Bruno Poucet and Pierre-Yves Jacob; Anna S. Mitchell, Brook A. L. Perry and Eleonora Lomi; Benjamin J. Clark and Ryan E. Harvey
  • Funder
  • Wellcome Trust
PUBLISHED 09 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15576.1
Software Tool Article metrics
BeamDelta: simple alignment tool for optical systems
[version 1; peer review: 1 approved, 1 approved with reservations]
Nicholas J. Hall, David Miguel Susano Pinto, Ian M. Dobbie
Peer Reviewers Thomas Huser; Ben Sherlock
  • Funders
  • Wellcome Trust
  • Medical Research Council
  • Engineering and Physical Sciences Research Council
PUBLISHED 06 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15090.2
Open Letter metrics
Revised
Genomic variant sharing: a position statement
[version 2; peer review: 2 approved]
Caroline F. Wright, James S. Ware, Anneke M. Lucassen, Alison Hall, Anna Middleton, Nazneen Rahman, Sian Ellard, Helen V. Firth
Peer Reviewers Gert Matthijs; Christa Lese Martin, Erin Rooney Riggs and Heidi Rehm
  • Funder
  • Wellcome Trust
LATEST VERSION PUBLISHED 04 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15590.1
Research Article metrics
Evolutionary analysis of the most polymorphic gene family in falciparum malaria
[version 1; peer review: 1 approved, 2 approved with reservations]
Thomas D. Otto, Sammy A. Assefa, Ulrike Böhme, Mandy J. Sanders, Dominic P. Kwiatkowski, Pf3k consortium, Matt Berriman, Chris Newbold
Peer Reviewers Kirk W. Deitsch; Thomas Lavstsen; Daniel B. Larremore
  • Funder
  • Wellcome Trust
PUBLISHED 03 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15536.2
Study Protocol metrics
Revised
Diagnostic accuracy and clinical impact of natriuretic peptide screening for the detection of heart failure in the community: a protocol for systematic review and meta-analysis
[version 2; peer review: 1 approved, 1 approved with reservations]
C. R. Goyder, A. K. Roalfe, N. R. Jones, K. S. Taylor, C. D. Plumptre, T. R. Fanshawe, F. D. R. Hobbs, C. J. Taylor
Peer Reviewers Kenneth McDonald; Abdallah Al-Mohammad
  • Funders
  • Wellcome Trust
  • National Institute for Health Research
LATEST VERSION PUBLISHED 03 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15495.2
Software Tool Article metrics
Revised
Malaria Data by District: An open-source web application for increasing access to malaria information
[version 2; peer review: 2 approved]
Sean Tomlinson, Andy South, Joshua Longbottom
Peer Reviewers Peter Macharia; Caroline A. Lynch
  • Funders
  • Wellcome Trust
  • Medical Research Council
LATEST VERSION PUBLISHED 02 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15137.2
Research Article metrics
Revised
Cardiovascular risk prediction in India: Comparison of the original and recalibrated Framingham prognostic models in urban populations.
[version 2; peer review: 2 approved]
Priti Gupta, David Prieto-Merino, Vamadevan S. Ajay, Kalpana Singh, Ambuj Roy, Anand Krishnan, K.M. Venkat Narayan, Mohammed K. Ali, Nikhil Tandon, Dorairaj Prabhakaran, Pablo Perel
Peer Reviewers Kay Tee Khaw; Katrina K. Poppe
  • Funders
  • Wellcome Trust
  • National Heart, Lung, and Blood Institute
  • Indian Council of Medical Research
LATEST VERSION PUBLISHED 02 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15603.1
Software Tool Article metrics
Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe
[version 1; peer review: 2 approved, 1 approved with reservations]
Martin Hunt, Phelim Bradley, Simon Grandjean Lapierre, Simon Heys, Mark Thomsit, Michael B. Hall, Kerri M. Malone, Penelope Wintringer, Timothy M. Walker, Daniela M. Cirillo, Iñaki Comas, Maha R. Farhat, Phillip Fowler, Jennifer Gardy, Nazir Ismail, Thomas A. Kohl, Vanessa Mathys, Matthias Merker, Stefan Niemann, Shaheed Vally Omar, Vitali Sintchenko, Grace Smith, Dick van Soolingen, Philip Supply, Sabira Tahseen, Mark Wilcox, Irena Arandjelovic, Tim E. A. Peto, Derrick W. Crook, Zamin Iqbal
Peer Reviewers Rebecca E. Colman; Duncan MacCannell; Conor J. Meehan
  • Funders
  • Wellcome Trust
  • Royal Society
  • Gates Foundation
PUBLISHED 02 Dec 2019
https://doi.org/10.12688/wellcomeopenres.15142.2
Research Article metrics
Revised
Evolution of late steps in exocytosis: conservation and specialization of the exocyst complex
[version 2; peer review: 3 approved]
Cordula Boehm, Mark C. Field
Peer Reviewers Derek Nolan; Viktor Žárský; Joshua H. Lipschutz
  • Funder
  • Wellcome Trust
LATEST VERSION PUBLISHED 29 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15573.1
Open Letter metrics
Knowledge gaps and research priorities in tuberculous meningitis
[version 1; peer review: 3 approved]
James A Seddon, Robert Wilkinson, Reinout van Crevel, Anthony Figaji, Guy E Thwaites, Tuberculous Meningitis International Research Consortium
Peer Reviewers Christopher Vinnard; Jamie Rylance; Hardeep Singh Malhotra
  • Funders
  • Wellcome Trust
  • European and Developing Countries Clinical Trials Partnership
  • Cancer Research UK
  • Francis Crick Institute
  • Department for International Development, UK Government
  • Meningitis Now
  • Medical Research Council
  • National Research Foundation
  • UK Research and Innovation
PUBLISHED 28 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15415.2
Research Article metrics
Revised
Perceived facilitators and barriers of enrolment, participation and adherence to a family based structured lifestyle modification interventions in Kerala, India: A qualitative study
[version 2; peer review: 3 approved]
Linju M. Joseph, T. R. Lekha, Dona Boban, Prinu Jose, Panniyammakal Jeemon
Peer Reviewers Elizabeth J. Unni; Rohina Joshi; Joe Varghese
  • Funder
  • The Wellcome Trust DBT India Alliance
LATEST VERSION PUBLISHED 27 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15580.1
Research Article metrics
Survey of ophthalmologists-in-training in Eastern, Central and Southern Africa: A regional focus on ophthalmic surgical education
[version 1; peer review: 2 approved]
William Dean, Stephen Gichuhi, John Buchan, Ibrahim Matende, Ronnie Graham, Min Kim, Simon Arunga, William Makupa, Colin Cook, Linda Visser, Matthew J Burton
Peer Reviewers Mohammed Mahdi Abdull; Brad Hal Feldman
  • Funder
  • Wellcome Trust
PUBLISHED 27 Nov 2019
https://doi.org/10.12688/wellcomeopenres.14731.3
Method Article metrics
Revised
A nested randomised trial of the effect of tranexamic acid on intracranial haemorrhage and infarction in traumatic brain injury (CRASH-3 trial intracranial bleeding mechanistic study): Statistical analysis plan
[version 3; peer review: 3 approved, 1 approved with reservations]
Abda Mahmood, Ian Roberts, Haleema Shakur-Still
Peer Reviewers Surakrant Yutthakasemsunt; John Hodsoll; Stephen Senn; Christian Gluud
  • Funders
  • Wellcome Trust
  • JP Moulton Charitable Trust (United Kingdom)
  • National Institute for Health Research
  • London School of Hygiene and Tropical Medicine
  • Joint Global Health Trials Scheme
LATEST VERSION PUBLISHED 27 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15405.2
Research Article metrics
Revised
Functional and proteomic analysis of a full thickness filaggrin-deficient skin organoid model
[version 2; peer review: 3 approved]
Martina S. Elias, Sheila C. Wright, William V. Nicholson, Kimberley D. Morrison, Alan R. Prescott, Sara Ten Have, Phillip D. Whitfield, Angus I. Lamond, Sara J. Brown
Peer Reviewers Sabine Werner; Neil Rajan; Sanja Kezic
  • Funders
  • Wellcome Trust
  • Tayside Dermatology Research Charity
  • Manknell Charitable Trust
  • Scottish Funding Council
  • British Skin Foundation
  • Highlands and Islands Enterprise
  • European Regional Development Fund
LATEST VERSION PUBLISHED 26 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15540.1
Open Letter metrics
Advancing good governance in data sharing and biobanking - international aspects
[version 1; peer review: 2 approved]
Buddhika Fernando, Mandella King, Athula Sumathipala
Peer Reviewers Chandanie Wanigatunga; Ravi Vaswani
  • Funders
  • Wellcome Trust
  • Medical Research Council
  • National Institutes of Health
  • Gates Foundation
PUBLISHED 22 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15551.1
Research Article metrics
Improving the design of studies evaluating the impact of diagnostic tests for tuberculosis on health outcomes: a qualitative study of perspectives of diverse stakeholders
[version 1; peer review: 2 approved]
Eleanor A. Ochodo, Selvan Naidoo, Samuel Schumacher, Karen Steingart, Jon Deeks, Frank Cobelens, Patrick M. Bossuyt, Taryn Young, Mark P. Nicol
Peer Reviewers Andrew McDowell; Elizabeth E. Lutge
  • Funder
  • Wellcome Trust
PUBLISHED 21 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15579.1
Study Protocol metrics
Randomized, double-blinded, controlled non-inferiority trials evaluating the immunogenicity and safety of fractional doses of Yellow Fever vaccines in Kenya and Uganda
[version 1; peer review: 2 approved]
Derick Kimathi, Aitana Juan, Philip Bejon, Rebecca F. Grais, George M. Warimwe, YEFE and NIFTY vaccine trials teams
Peer Reviewers Anna H. E. Roukens; Akira Homma
  • Funders
  • Wellcome Trust
  • European and Developing Countries Clinical Trials Partnership
  • African Academy of Sciences
  • Médecins Sans Frontières
  • Tropical Network Fund, University of Oxford
  • Oak Foundation
PUBLISHED 20 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15173.2
Study Protocol metrics
Revised
Point-of-care testing and treatment of sexually transmitted infections to improve birth outcomes in high-burden, low-income settings: Study protocol for a cluster randomized crossover trial (the WANTAIM Trial, Papua New Guinea)
[version 2; peer review: 2 approved]
Andrew J. Vallely, William S. Pomat, Caroline Homer, Rebecca Guy, Stanley Luchters, Glen D. L. Mola, Grace Kariwiga, Lisa M. Vallely, Virginia Wiseman, Chris Morgan, Handan Wand, Stephen J. Rogerson, Sepehr N. Tabrizi, David M. Whiley, Nicola Low, Rosanna Peeling, Peter Siba, Michaela Riddell, Moses Laman, John Bolnga, Leanne J. Robinson, Jacob Morewaya, Steven G. Badman, Neha Batura, Angela Kelly-Hanku, Pamela J. Toliman, Wilfred Peter, Delly Babona, Elizabeth Peach, Suzanne M. Garland, John M. Kaldor
Peer Reviewers Matthew Hamill; Nicole Young
  • Funders
  • Wellcome Trust
  • Papua New Guinea Institute of Medical Research
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
  • Department for International Development, UK Government
  • Medical Research Council
  • National Health and Medical Research Council
LATEST VERSION PUBLISHED 20 Nov 2019
https://doi.org/10.12688/wellcomeopenres.15591.1
Editorial metrics NOT PEER REVIEWED
Tuberculous meningitis: new tools and new approaches required
[version 1; peer review: not peer reviewed]
James A Seddon, Guy E Thwaites, Tuberculous Meningitis International Research Consortium
  • Funder
  • Wellcome Trust
PUBLISHED 19 Nov 2019
1,621-1,640 of 2,072 ARTICLES
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